Package: heritable
Title: Heritability Estimation from Linear Mixed Models
Version: 0.2.0
Authors@R: 
    c(
    person(given = "Emi", family = "Tanaka", role = c("cre", "aut", "cph"), email = c("dr.emi.tanaka@gmail.com"), comment = c(ORCID = "0000-0002-1455-259X")),
    person(given = "Yidi", family = "Deng", role = c("aut"), comment = c(ORCID = "0000-0003-0380-2124")),
    person(given = "Fonti", family = "Kar", role = c("aut"), comment = c(ORCID = "0000-0002-2760-3974")),
    person(given = "Weihao (Patrick)", family = "Li", role = c("ctb"), comment = c(ORCID = "0000-0003-4959-106X")),
    person(given = "Paul", family = "Schmidt", role = c("ctb"))
    )
Description: Provides flexible estimation of broad- and narrow-sense
        heritability from linear mixed models fitted with 'asreml' or
        'lme4'. Implements commonly used estimators, including the
        Standard, Cullis, Oakey, Piepho, and Delta methods. Supports
        complex model structures, marginal and environment-specific
        heritability for genotype-by-environment models, and confidence
        intervals based on parametric bootstrap. The implemented
        estimators include methods discussed by Schmidt et al. (2019)
        <doi:10.1534/genetics.119.302134>.
License: GPL (>= 3)
Imports: asremlPlus, boot, cli, irlba, MASS, Matrix, methods,
        reformulas, stringr, vctrs
Suggests: testthat (>= 3.0.0), agridat, knitr, rmarkdown, lme4,
        glmmTMB, pbkrtest, dplyr, ggplot2, tidyr, purrr, here
SystemRequirements: asreml (>= 4.2.0)
Config/testthat/edition: 3
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Depends: R (>= 4.2.0)
LazyData: true
VignetteBuilder: knitr
URL: https://anu-aagi.github.io/heritable/
Language: en
Config/roxygen2/version: 8.1.0
Config/pak/sysreqs: cmake libfftw3-dev libfontconfig1-dev
        libfreetype6-dev libfribidi-dev git make libharfbuzz-dev
        libgit2-dev libicu-dev libjpeg-dev libpng-dev libtiff-dev
        libuv1-dev libwebp-dev libxml2-dev libssl-dev libx11-dev
        zlib1g-dev
Repository: https://anu-aagi.r-universe.dev
Date/Publication: 2026-08-18 10:37:59 UTC
RemoteUrl: https://github.com/anu-aagi/heritable
RemoteRef: HEAD
RemoteSha: 4625fb85243dc37b15951c7e872ea32250a845d5
NeedsCompilation: no
Packaged: 2026-08-18 11:20:12 UTC; root
Author: Emi Tanaka [cre, aut, cph] (ORCID:
    <https://orcid.org/0000-0002-1455-259X>),
  Yidi Deng [aut] (ORCID: <https://orcid.org/0000-0003-0380-2124>),
  Fonti Kar [aut] (ORCID: <https://orcid.org/0000-0002-2760-3974>),
  Weihao (Patrick) Li [ctb] (ORCID:
    <https://orcid.org/0000-0003-4959-106X>),
  Paul Schmidt [ctb]
Maintainer: Emi Tanaka <dr.emi.tanaka@gmail.com>